Insertion junction: CLIP2.045902_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045902
Chromosome:chromosome 6
Location:5599438
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287450 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGGGTTCGCACGCAACATGCTCAGCGGCCGGCCCGACATGCAGGAGC
Internal bar code:CGTCTAAGAGGTGAATCTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2301
LEAP-Seq percent confirming:29.1667
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCTGAGACCCCAATGTT
Suggested primer 2:CGAGCTTTGTGTGTGTGGTG