Insertion junction: CLIP2.045906_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045906
Chromosome:chromosome 9
Location:4892072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801061 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGAACCACGGCTTCAAGATGTGGCACCTCAGGGACCCACCAACTTGGC
Internal bar code:AAGCACACATTATGGGAATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3912
LEAP-Seq percent confirming:56.962
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:TAGAATCGTGCGGCTGCTAG
Suggested primer 2:GCATGCTATTGTGCCTTCCG