Insertion junction: CLIP2.045906_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045906
Chromosome:chromosome 9
Location:4892100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801061 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATGTGGGACCCGCACCAGGGCCCAGTGGCATGCTCCTGAGACCCGGG
Internal bar code:GCAAGTTTTGAGGTCCGCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3031
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGCTATTGTGCCTTCCG
Suggested primer 2:TAGAATCGTGCGGCTGCTAG