Insertion junction: CLIP2.045910_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045910
Chromosome:chromosome 8
Location:3356957
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g377600 ATG14 AuTophaGy related; (1 of 1) PF10186 - Vacuolar sorting 38 and autophagy-related subunit 14 (Atg14) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCACGCACACGGTGTCAAGCCGCTCTCCTTTTGCGTGTTCCCTCACAC
Internal bar code:GTGCTGGTGTTGAGCCTATCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:47
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGTGCTGATTGTGTGTG
Suggested primer 2:CACTGTCACGACTCCAGCTT