Insertion junction: CLIP2.045916_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045916
Chromosome:chromosome 3
Location:5496522
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184700 (1 of 1) PTHR31810//PTHR31810:SF6 - FAMILY NOT NAMED // METACASPASE-4-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTCCCCGATGCAAGCGTTCGAGGGGGTGTACAGGGCGTTGGGGGTAA
Internal bar code:AACGCTAACGAGGAAGGTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1282
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCCAGACATGTCACTGC
Suggested primer 2:GGCAAGAAGGCTGTCCTCAT