Insertion junction: CLIP2.045928_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045928
Chromosome:chromosome 5
Location:1114164
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248150 PGA2 1-acylglycerophosphocholine O-acyltransferase; (1 of 3) 2.3.1.25 - Plasmalogen synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAATGGGAGGTCAGGAAGAGAGTCAGACGCGGGTTGGGATGGACTGGA
Internal bar code:AATGTCGCACGCCCGTAAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2505
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTACGCCTCCTACCATCA
Suggested primer 2:TTCCCCATGGTGTGTATGGC