Insertion junction: CLIP2.045935_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045935
Chromosome:chromosome 7
Location:3654490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337450 GT90F9,GT90-9,CGL75 Glycosyl transferase GT90 family protein 9; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCAGGAGTGCGATGAGGGCAGTGCACATGCCACCCGTGCTCGCGGGC
Internal bar code:ATGTGTATTTTTATAACCTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1247
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCAGCAGCTTATCCACAC
Suggested primer 2:GTAGGCTGGCGACTGTATCC