Insertion junction: CLIP2.045937_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045937
Chromosome:chromosome 17
Location:3928879
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802075 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAATTCGAGGAGGTGCGTGCAGGTGCCGGTGGTGGTGCCGGTTGGGGG
Internal bar code:TATCTATAGCGGGTTAACGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:923
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCTCTCGTGGAACTTGA
Suggested primer 2:ATTGTGCATGTGGGTCCGAT