Insertion junction: CLIP2.045938_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045938
Chromosome:chromosome 13
Location:3874232
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589600 (1 of 100) IPR001810 - F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAGATTAAGTCGCTATAAGGCAACATTGCAGTGGTTGGTTGGCACCAA
Internal bar code:TAGGTACCATGACTGAATGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1384
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TTATCCGTCGGGGGTGTTTG
Suggested primer 2:TGAGCTCATCATCGGACACG