Insertion junction: CLIP2.045942_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045942
Chromosome:chromosome 12
Location:5397598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529250 (1 of 8) PTHR11339//PTHR11339:SF290 - EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED // PROTEIN T26A8.1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCAGCTAAACGGCCAACTGTCCTATGAGACCGGCGCAGTGACACTCTG
Internal bar code:TCCTAGGGTAATAAAAGTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3648
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:124
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:124

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAACTCAAGGGGTTTGT
Suggested primer 2:TTCACAGCCAAGCTTAGGGG