Insertion junction: CLIP2.045943_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045943
Chromosome:chromosome 10
Location:6510960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g465300 (1 of 89) 3.6.4.13 - RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTAGCGGGGAGTTCGCGCGGCGCAGCCGCTCCTCCTACTCCTACTCCC
Internal bar code:TCAAACGGGGGAGTGGTAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3156
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTGTTGCTTCCCATG
Suggested primer 2:TACCATGACTCCAGCCGGTA