Insertion junction: CLIP2.045950_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045950
Chromosome:chromosome 2
Location:7157927
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390356 (1 of 1) PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCGATGGGCGCGGTGAAGGGATCGGCCGTGCCAGCGTGTTTTGGGCC
Internal bar code:TGTGAAAGTTTTAAGCATATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1201
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACACAGCTTTCTTGCGC
Suggested primer 2:GTCCGGTCTTCCAGTTCAGG