Insertion junction: CLIP2.045951_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045951
Chromosome:chromosome 1
Location:5113290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGACGACCCAGATGCGCCCGAGTACAAGGAGGACCGCAAGCGCTTCGT
Internal bar code:GATTCTGATAATATGCAGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:54
LEAP-Seq percent confirming:3.125
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCGGCTTTGTTCCATTTG
Suggested primer 2:CGGAATGGCCCAGTTACCTT