Insertion junction: CLIP2.045955_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045955
Chromosome:chromosome 6
Location:5952763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g290100 SYP6 Early endosomal Qc-SNARE protein, Syx6/Tlg1/Syntaxin 6-family (Qc.III.b); (1 of 1) K08498 - syntaxin 6 (STX6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAAGTGCCGACTGAGGGCGGAGGCAGGGGGCATAGGCGGGGTTGCAGG
Internal bar code:TGCACCTTTAGCAGCCGGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:295
LEAP-Seq percent confirming:9.52381
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGCTGCTCACATGAAGG
Suggested primer 2:AGAACCAAACCCAAAGGCCA