Insertion junction: CLIP2.045958_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045958
Chromosome:chromosome 6
Location:3927027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278194 FAP236 (1 of 3) PF05217 - STOP protein (STOP); Flagellar Associated Protein 236 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAAAGAGCGCGTTTGCCGCAGGCAGGAATTTGTTGATGACAGTCAGC
Internal bar code:CAACACTATTCGCGGTGATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1545
LEAP-Seq percent confirming:71.0843
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGTGGCGGTGTAGCTACT
Suggested primer 2:GATGGAGTCAGCGGCTAGTC