Insertion junction: CLIP2.045965_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045965
Chromosome:chromosome 13
Location:1686970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g574050 (1 of 6) PTHR10994//PTHR10994:SF72 - RETICULON // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGTGTTCGTGTGGGGGCTGCCCCATGCATGCCACAACCACAACCCCG
Internal bar code:TGACAGTGCATGCGAGTGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:384
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGACACGACTGCAGCAT
Suggested primer 2:GGATGTCACCCCACGAACAT