Insertion junction: CLIP2.045967_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045967
Chromosome:chromosome 13
Location:1937062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576150 APN1 (1 of 1) PTHR11707//PTHR11707:SF3 - L-ASPARAGINASE // SUBFAMILY NOT NAMED; L-asparaginase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACCGCCTAGCTGTGCGCGCGTGTGTGTGCACGTGTCTGCTACTGATA
Internal bar code:TTACGGTATTTAGTTTTAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:522
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTTCCAATCCGCCCTTGA
Suggested primer 2:TACTTGCACCCGTTCAGTCC