Insertion junction: CLIP2.045967_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045967
Chromosome:chromosome 13
Location:1937070
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576150 APN1 (1 of 1) PTHR11707//PTHR11707:SF3 - L-ASPARAGINASE // SUBFAMILY NOT NAMED; L-asparaginase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAGGGGTAGGTGAGCGAGTCAAAGGCCTGGTAGGCGGCCGAGTTGACC
Internal bar code:TTACGGTATTTAGTTTTAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1307
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TACTTGCACCCGTTCAGTCC
Suggested primer 2:GTCTTCCAATCCGCCCTTGA