Insertion junction: CLIP2.045977_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045977
Chromosome:chromosome 12
Location:2708070
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505050 (1 of 13) PF00646 - F-box domain (F-box) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAGGGGTGAGCACTGCAATGCAGCCTGGCTTGGGGGGGACGACACTG
Internal bar code:ATCCATAATGTTGCTCAGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1217
LEAP-Seq percent confirming:65.9091
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACAGACCCGTGTGCTTG
Suggested primer 2:GCCCTCGACTCTTCACACAA