Insertion junction: CLIP2.045978_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045978
Chromosome:chromosome 1
Location:783668
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004200 (1 of 44) IPR000048 - IQ motif, EF-hand binding site intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTGGAGTGCAGGCTGACGCGGGAACTGACGCACATGCACCTATGTAT
Internal bar code:CTATGACAGGGCGTAGAGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2714
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAGATTTTGCAGGAGCC
Suggested primer 2:CAAGGTTCTGCGCGAAACAA