Insertion junction: CLIP2.045980_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045980
Chromosome:chromosome 4
Location:3772159
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00096397

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCTTACATTTCTCTGATGCTGTCCGACCCTCTTGCGTGCTGCAACGT
Internal bar code:GTTTGAGTGTATTCGAGGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1473
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTTGACAACTGTGCTG
Suggested primer 2:CCATCGTCGTGCCGTATGTA