Insertion junction: CLIP2.046000_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046000
Chromosome:chromosome 1
Location:6718908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048000 TPM1 Tropomyosin 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATAGGAGGCACAGCAATCAGCACTCCTGGGGACTGCCACACCACAACC
Internal bar code:GCATTCCAATTAGTCATTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3349
LEAP-Seq percent confirming:94.5946
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TATCGAGGGCCAGGAGGAAA
Suggested primer 2:TATGGCGATTCCCGTACTGC