Insertion junction: CLIP2.046003_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046003
Chromosome:chromosome 3
Location:437123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144887 (1 of 1) IPR000048//IPR003590//IPR006553 - IQ motif, EF-hand binding site // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAGGAAGAAGAGTGTGTGTGTGTGTGGGGGGGGGTTCACTTTCCGGC
Internal bar code:ACAGGGGTGCGTTGGGGTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:621
LEAP-Seq percent confirming:52.9412
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCAACTCCACTGCTCGG
Suggested primer 2:CCAGGTTGAGGCAGTAGTGG