Insertion junction: CLIP2.046015_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046015
Chromosome:chromosome 13
Location:1130795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569500 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTTCACCTGACGCCCGAGCACATCGCCGAGCTTGATGCAGCCGTGGA
Internal bar code:GATTTAACTTATTGCAGTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2801
LEAP-Seq percent confirming:76.3158
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCACGAAGAGACAACCA
Suggested primer 2:CGCATGTATGAACGGGCAAG