Insertion junction: CLIP2.046018_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046018
Chromosome:chromosome 13
Location:44699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801504 (1 of 1) K03470 - ribonuclease HII (rnhB) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGAAAGTGCGGTGCCGGTCATGGCACACCATCAGTATGAAGCGTCAGC
Internal bar code:ACCCGATGTCAATCCTACGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3299
LEAP-Seq percent confirming:65.625
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGATCTCGTAGCTGCTCG
Suggested primer 2:CAGATGACTGCATGCGCTTC