Insertion junction: CLIP2.046030_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046030
Chromosome:chromosome 10
Location:5643666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458900 SRR33 (1 of 39) IPR001190 - SRCR domain; Scavenger receptor cysteine rich (SRCR) protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCTTGAAGTCCCGAGCCTCCACATCTGTTGATTTCAAGAGCATATGCA
Internal bar code:GTTACCTGGTGAGATATAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1816
LEAP-Seq percent confirming:40.7407
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CACATAATCCGCGTCCCGTA
Suggested primer 2:CCCTGTTGCCCATGTATGGT