Insertion junction: CLIP2.046031_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046031
Chromosome:chromosome 6
Location:3715209
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278158 (1 of 2) IPR001283//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Pistil-specific extensin-like protein // CAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGGCTGGGGTTACTGGGCCAGGCTGGCCGCCGTGGCCGCCGCGGCGG
Internal bar code:TAGTCGGCTATGGTTTATCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2045
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGTGGGATCGTCGGTCT
Suggested primer 2:AGGTCCGAATACCCTCACCA