Insertion junction: CLIP2.046031_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046031
Chromosome:chromosome 6
Location:3715231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278158 (1 of 2) IPR001283//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Pistil-specific extensin-like protein // CAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCGTTGCCGCCGCGGCCGGTGCGTGCGCGCGCGAGCCCGGCGCCGCC
Internal bar code:TAGTCGGCTATGGTTTATCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:326
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCCGAATACCCTCACCA
Suggested primer 2:TACAGTGGGATCGTCGGTCT