Insertion junction: CLIP2.046033_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046033
Chromosome:chromosome 6
Location:4858840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280350 (1 of 5) IPR001680//IPR011047//IPR017986//IPR020472 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain // G-protein beta WD-40 repeat 3'UTR
Cre06.g280385 PAP6 predicted protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGGCACTCTTGCACCCCGCGCGACCCTCCGCCGCCTTCGCCTGCTCC
Internal bar code:ACATTGAACGTAAGTAATGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1165
LEAP-Seq percent confirming:82.6087
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACTCAGTGTAGGCTTCA
Suggested primer 2:TACGTGTCCAAGACCATGCC