Insertion junction: CLIP2.046042_5

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046042
Chromosome:chromosome 17
Location:5270757
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTGTGAGCCACCGCCATCACCAATTCATGGTGTGGTGCCGACACCTG
Internal bar code:TGTGTCGTTGAAAACGTTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:799
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGTGATGCCCTACCTT
Suggested primer 2:TCCCTCTCTCTTCAGTCCCG