Insertion junction: CLIP2.046049_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046049
Chromosome:chromosome 2
Location:221589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800152 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTATATAGCCCTGCGGACGGCGCCCTGGGGCATCTAGTGTGTCTTTTG
Internal bar code:CGCTGTGGCGGTCCGTTAATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2615
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTACTCTGGAGGTGGCG
Suggested primer 2:GTCGGGAGGGTAGAGTGAGT