Insertion junction: CLIP2.046049_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046049
Chromosome:chromosome 2
Location:221596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800152 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACTTGTGTGTCGTAGAACTTCCGTGTTCCGCCCACAGCGGGGCCCAA
Internal bar code:AAATAACCCTCTTGGGCTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1278
LEAP-Seq percent confirming:3.77358
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGGAGGGTAGAGTGAGT
Suggested primer 2:CCTTTACTCTGGAGGTGGCG