Insertion junction: CLIP2.046062_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046062
Chromosome:chromosome 3
Location:4469450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175600 (1 of 1) PTHR26392//PTHR26392:SF78 - MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED // SUBFAMILY NOT NAMED 3'UTR
Cre03.g800332 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTACCACCCGGTGCCTGCCCCCCCAACACCTGCTTCATACGTTTGCTA
Internal bar code:TTTATTGAAGATCAGGGTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:392
LEAP-Seq percent confirming:18.75
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGCACGCGCATTACTAC
Suggested primer 2:CGCGACCATGAACAACATCC