Insertion junction: CLIP2.046065_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046065
Chromosome:chromosome 7
Location:5009048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347400 (1 of 2) K11135 - Pin2-interacting protein X1 (PINX1) intron
Cre07.g347450 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGCGAAATCACTCGCCCTGATAACCACTTTGCGCCGGCTGTATGTG
Internal bar code:CGTGCTCTTAGATGTAGCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5073
LEAP-Seq percent confirming:57.6923
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TTACCAGGGCGGGTGATTTC
Suggested primer 2:GCAAGAGCAAGCACAACGAA