Insertion junction: CLIP2.046066_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046066
Chromosome:chromosome 13
Location:2664124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581350 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGGAAGGACGAACCCCGGCTCGCTGTTGTGCAGGCACCGCTGCGGCT
Internal bar code:TTGCTGGACGTACGTGAAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3502
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGGCTGCAGATGTCCAA
Suggested primer 2:AGGCGGTTGTAAAGTCTGCA