Insertion junction: CLIP2.046071_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046071
Chromosome:chromosome 9
Location:2125398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395950 AOX1 Alternative oxidase, mitochondrial; (1 of 2) PTHR31803//PTHR31803:SF3 - FAMILY NOT NAMED // ALTERNATIVE OXIDASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAAGCGTCAGGCACGCGGCGGCCACCGCAAGTAGTAACTAGGGGCCC
Internal bar code:AACATCCAATCACAGCGCGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:655
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATCACGAACACGTCTGA
Suggested primer 2:ATATGAGCCCCAACCCTCCT