Insertion junction: CLIP2.046078_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046078
Chromosome:chromosome 6
Location:3135775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275550 RWP2 (1 of 1) IPR003035//IPR003072 - RWP-RK domain // Orphan nuclear receptor, NOR1 type; RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGACACGCAGCGTGGCCCCCTCAGCGCTCCCAACCGGGGCGGGCACG
Internal bar code:GATAAGCAAGTACGAACTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1834
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGATTCCTTCGGGTGTGCAG
Suggested primer 2:TAGCGTGAATGGGCAACAGT