Insertion junction: CLIP2.046083_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046083
Chromosome:chromosome 16
Location:1972598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656400 SQD1 (1 of 1) 3.13.1.1 - UDP-sulfoquinovose synthase / Sulfite:UDP-glucose sulfotransferase; UDP-sulfoquinovose synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCCCAAACACACAACCGTGCCACAATCCATGGTTCGCCCCCATGCTG
Internal bar code:GCCTAGCAGCCTATAAAATCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2916
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAATGCGACAACACAGGT
Suggested primer 2:CAGGCGTTTCAGTCAGTCCT