Insertion junction: CLIP2.046096_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046096
Chromosome:chromosome 3
Location:2763673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161550 FAP55 (1 of 1) IPR009053//IPR023220 - Prefoldin // Type IV secretion system, VirB5-domain; Flagellar Associated Protein 55 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGGCTGCCGGACATGGGCATCAAGGACCTGGAACGCCAGGTCAAGC
Internal bar code:ATTGAGAAGAAGACCCGTTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3047
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGAGACGACGTTCAGAA
Suggested primer 2:GCAGAAAGCTGACACCCTCT