Insertion junction: CLIP2.046096_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046096
Chromosome:chromosome 3
Location:2763865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161550 FAP55 (1 of 1) IPR009053//IPR023220 - Prefoldin // Type IV secretion system, VirB5-domain; Flagellar Associated Protein 55 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTGCTTTTGGTTACGAACGTGCACGCGCGTCGCGCGCCTCCCACCCAG
Internal bar code:TGCCTAGGGTTCTCTAGCCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1384
LEAP-Seq percent confirming:46.3415
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAAAGCTGACACCCTCT
Suggested primer 2:GCCAGAGACGACGTTCAGAA