Insertion junction: CLIP2.046101_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046101
Chromosome:chromosome 10
Location:1984725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432150 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCGCACCCGAGGTGAGCAGTGCAGCGATGTGTTTGGATGTACCGGAC
Internal bar code:AGGTAGGGCGGTAAATAAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:834
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGGTCGAGCATCTGAGGA
Suggested primer 2:ATCTGACATGGCCAAGGTGG