Insertion junction: CLIP2.046105_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046105
Chromosome:chromosome 9
Location:82561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386250 SMM33 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCATTAAGGCATGCATGAAAGTGGCACACACCTCCACCGGCGTTGCC
Internal bar code:GTCTGCACATACAACCTGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2409
LEAP-Seq percent confirming:88.3721
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCGTGCATTATGAAGTG
Suggested primer 2:ACATCTGGGACCATGCTGTG