Insertion junction: CLIP2.046106_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046106
Chromosome:chromosome 7
Location:476849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315550 (1 of 2) IPR005654//IPR027417 - ATPase, AFG1-like // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGATAAATATGGTCTCGGCTCAGCAGGTCGGTCGGCGGTAAGTATACT
Internal bar code:AATCATTCCTCAATCCAATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:665
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTAGGACTGTTGGCATGG
Suggested primer 2:GCCTTGTTGTTCACCACGAC