Insertion junction: CLIP2.046114_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046114
Chromosome:chromosome 13
Location:4289494
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592300 (1 of 1) 1.3.1.91 - tRNA-dihydrouridine(20) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGACGAGCAACCACACCCATGAGCCGTACTGTGAGAGCGCCACCCTGT
Internal bar code:ATTGCGGATTTAGGGACGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1144
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGCCGATCATAGATGT
Suggested primer 2:CGGCTACAAATGTGCGTACG