Insertion junction: CLIP2.046114_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.046114
Chromosome:chromosome 13
Location:4289510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592300 (1 of 1) 1.3.1.91 - tRNA-dihydrouridine(20) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAAGGCAAATGCTTACCGGCGGCCATGGGCACTGCGCATTGCAGGAGA
Internal bar code:GGGGAGGCTGCTTTTAATACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:876
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTACAAATGTGCGTACG
Suggested primer 2:CCGCTGCCGATCATAGATGT