Insertion junction: CLIP2.046123_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046123
Chromosome:chromosome 3
Location:686539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145807 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGATTGAAGACGCCTCCGCCCACGAACCACTGCAGCAGCTCCCCCTC
Internal bar code:TTGGAACTCAGCTTGATAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2834
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGTTTGATGTGCAGTGG
Suggested primer 2:CGTCAGCAGGGCTCTATCTG