Insertion junction: CLIP2.046128_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046128
Chromosome:chromosome 2
Location:7870466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145900 (1 of 6) PTHR15907//PTHR15907:SF21 - FAMILY NOT NAMED // DUF614 FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAACCTGAACCTGAACCTGAACCTAAACCTGAACCTGCTGAGTCCCTG
Internal bar code:CGGATAGGAAACAAAAACTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:684
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGGAGGGCGTGTAGTAT
Suggested primer 2:TAAAATGACGTCGGCGGGAA