Insertion junction: CLIP2.046140_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046140
Chromosome:chromosome 10
Location:2037491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432500 CND1 Condensin complex component; (1 of 1) K06677 - condensin complex subunit 1 (YCS4, CNAP1, CAPD2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAATTGCCGGAAGATGTTGCTGCGAAAGGAGCAGATGGGAAGGGCAT
Internal bar code:AGTGAGGCACTAAGACCAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2399
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGTTTAACCTACCCGCG
Suggested primer 2:GCGGCAAAGTACTGCAAACA