Insertion junction: CLIP2.046141_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046141
Chromosome:chromosome 10
Location:3389404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443850 (1 of 1) PTHR11851//PTHR11851:SF136 - METALLOPROTEASE // PROTEIN YHJJ intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTCATGCATGGAGTTCCCCCACGTCATCCCCGCCTGCAGGTACCAGC
Internal bar code:GAACTAATTGACCGATTGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:315
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCCTAATGGGGTGGGTAT
Suggested primer 2:AGGCTCCTGTTGTTGTAGGC