Insertion junction: CLIP2.046143_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046143
Chromosome:chromosome 1
Location:5060561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035250 (1 of 1) PTHR21549:SF0 - COILED-COIL DOMAIN-CONTAINING PROTEIN 112 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCCGGCACTCTGGGCCTCGCCCGCCCCGCTCACCCGTGGGGCCGTGC
Internal bar code:GCGAGAACTCAGGTGTTTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2807
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:TACCCTTGCAAGCGAGAAGG
Suggested primer 2:CGCACACGTAGATAGACGCT